CRISPRone

CRISPRone report for GCA_003838525.1_ASM383852v1

♦ Seq 1: NSVO01000018.1 Pseudomonas aeruginosa strain AMT0026-3 IPC555_18.1, whole genome shotgun sequence

⇒Summary: seq-len = 106187 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 40318-50762 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 40318-41426 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 40318-41426 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 41686-42660 bp Gene: COG1203:cas3 Type: Type-I Location: 42657-45887 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 45945-47249 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 47236-48219 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 48230-49258 bp Gene: cd09739:cas6f Type: other Location: 49262-49825 bp CRISPR array Location: 50075-50762 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 50075-50762 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 40318-41426 bp]: array | spacers
           [Locus range 50075-50762 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)