CRISPRone

CRISPRone report for GCA_003838925.1_ASM383892v1

♦ Seq 1: NSWW01000024.1 Pseudomonas aeruginosa strain AUS496 IPC441_24.1, whole genome shotgun sequence

⇒Summary: seq-len = 48478 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 515-10772 bp Zoom in on locus 1 x15 x14 CRISPR array Location: 515-1383 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 515-1383 bp Num of repeats: 15 Spacers: s1-s14 Gene: cd09718:cas1 Type: universal Location: 1644-2618 bp Gene: COG1203:cas3 Type: Type-I Location: 2615-5845 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5903-7207 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7194-8177 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8188-9216 bp Gene: cd09739:cas6f Type: other Location: 9220-9783 bp CRISPR array Location: 9966-10772 bp Num of repeats: 14 Spacers: s15-s27 CRISPR array Location: 9966-10772 bp Num of repeats: 14 Spacers: s15-s27 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 515-1383 bp]: array | spacers
           [Locus range 9966-10772 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSWW01000014.1 Pseudomonas aeruginosa strain AUS496 IPC441_14.1, whole genome shotgun sequence

⇒Summary: seq-len = 116463 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 516-1084 bp Zoom in on locus 1 x10 CRISPR array Location: 516-1084 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 516-1084 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 516-1084 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)