CRISPRone

CRISPRone report for GCA_003838975.1_ASM383897v1

♦ Seq 1: NSWU01000002.1 Pseudomonas aeruginosa strain AUS507 IPC446_2.1, whole genome shotgun sequence

⇒Summary: seq-len = 611880 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 313053-323409 bp Zoom in on locus 1 x17 x12 CRISPR array Location: 313053-314057 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 313053-314057 bp Num of repeats: 17 Spacers: s1-s16 Gene: pfam09707:cas2 Type: universal Location: 314122-314421 bp Gene: cd09719:cas1 Type: universal Location: 314418-314729 bp Gene: pfam08798:cas6e Type: other Location: 314756-315295 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 315342-316004 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 316006-317148 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 317158-317688 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 317685-319253 bp Gene: cd09641:cas3HD Type: Type-I Location: 319256-321937 bp CRISPR array Location: 322710-323409 bp Num of repeats: 12 Spacers: s17-s27 CRISPR array Location: 322710-323409 bp Num of repeats: 12 Spacers: s17-s27 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 313053-314057 bp]: array | spacers
           [Locus range 322710-323409 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSWU01000025.1 Pseudomonas aeruginosa strain AUS507 IPC446_25.1, whole genome shotgun sequence

⇒Summary: seq-len = 81740 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37728-48588 bp Zoom in on locus 1 x19 x20 CRISPR array Location: 37728-38836 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 37728-38836 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 39019-39582 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39586-40614 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40625-41608 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41595-42899 bp Gene: COG1203:cas3 Type: Type-I Location: 42957-46187 bp Gene: cd09718:cas1 Type: universal Location: 46184-47158 bp CRISPR array Location: 47419-48588 bp Num of repeats: 20 Spacers: s19-s37 CRISPR array Location: 47419-48588 bp Num of repeats: 20 Spacers: s19-s37 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37728-38836 bp]: array | spacers
           [Locus range 47419-48588 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)