CRISPRone

CRISPRone report for GCA_003839125.1_ASM383912v1

♦ Seq 1: NSXF01000001.1 Pseudomonas aeruginosa strain AUS151 IPC391_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 874944 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 424646-425753 bp Zoom in on locus 1 x19 CRISPR array Location: 424646-425753 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 424646-425753 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 424646-425753 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSXF01000018.1 Pseudomonas aeruginosa strain AUS151 IPC391_18.1, whole genome shotgun sequence

⇒Summary: seq-len = 70627 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 22053-32193 bp Zoom in on locus 1 x19 x8 CRISPR array Location: 22053-23161 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 22053-23161 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 23422-24396 bp Gene: COG1203:cas3 Type: Type-I Location: 24393-27623 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27681-28985 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 28972-29955 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 29966-30994 bp Gene: cd09739:cas6f Type: other Location: 30998-31561 bp CRISPR array Location: 31746-32193 bp Num of repeats: 8 Spacers: s19-s25 CRISPR array Location: 31746-32193 bp Num of repeats: 8 Spacers: s19-s25 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 22053-23161 bp]: array | spacers
           [Locus range 31746-32193 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)