CRISPRone

CRISPRone report for GCA_003839205.1_ASM383920v1

♦ Seq 1: NSXK01000015.1 Pseudomonas aeruginosa strain AUS134 IPC375_15.1, whole genome shotgun sequence

⇒Summary: seq-len = 77093 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37906-48757 bp Zoom in on locus 1 x28 x11 CRISPR array Location: 37906-39555 bp Num of repeats: 28 Spacers: s1-s27 CRISPR array Location: 37906-39555 bp Num of repeats: 28 Spacers: s1-s27 Gene: cd09739:cas6f Type: other Location: 39739-40302 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40306-41334 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 41345-42328 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 42315-43619 bp Gene: COG1203:cas3 Type: Type-I Location: 43677-46907 bp Gene: cd09718:cas1 Type: universal Location: 46904-47878 bp CRISPR array Location: 48130-48757 bp Num of repeats: 11 Spacers: s28-s37 CRISPR array Location: 48130-48757 bp Num of repeats: 11 Spacers: s28-s37 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37906-39555 bp]: array | spacers
           [Locus range 48130-48757 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)