CRISPRone

CRISPRone report for GCA_003839285.1_ASM383928v1

♦ Seq 1: NSXU01000024.1 Pseudomonas aeruginosa strain AUS077 IPC347_24.1, whole genome shotgun sequence

⇒Summary: seq-len = 72849 bp; # of CRISPR array = 2; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 34377-44397 bp Zoom in on locus 1 x11 x14 CRISPR array Location: 34377-35005 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 34377-35005 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09739:cas6f Type: other Location: 35189-35752 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 35756-36784 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 36795-37778 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 37765-39069 bp Gene: COG1203:cas3 Type: Type-I Location: 39127-41712 bp Gene: cd09673:cas3f Type: Subtype-I-F Location: 41848-42357 bp Gene: cd09718:cas1 Type: universal Location: 42354-43328 bp CRISPR array Location: 43590-44397 bp Num of repeats: 14 Spacers: s11-s23 CRISPR array Location: 43590-44397 bp Num of repeats: 14 Spacers: s11-s23 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 34377-35005 bp]: array | spacers
           [Locus range 43590-44397 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSXU01000023.1 Pseudomonas aeruginosa strain AUS077 IPC347_23.1, whole genome shotgun sequence

⇒Summary: seq-len = 73515 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 9835-10942 bp Zoom in on locus 1 x19 CRISPR array Location: 9835-10942 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 9835-10942 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 9835-10942 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)