CRISPRone

CRISPRone report for GCA_003839305.1_ASM383930v1

♦ Seq 1: NSXW01000018.1 Pseudomonas aeruginosa strain AUS066 IPC345_18.1, whole genome shotgun sequence

⇒Summary: seq-len = 94320 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2405-2974 bp Zoom in on locus 1 x10 CRISPR array Location: 2405-2974 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 2405-2974 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 2405-2974 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSXW01000025.1 Pseudomonas aeruginosa strain AUS066 IPC345_25.1, whole genome shotgun sequence

⇒Summary: seq-len = 50690 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38722-49390 bp Zoom in on locus 1 x28 x8 CRISPR array Location: 38722-40369 bp Num of repeats: 28 Spacers: s1-s27 CRISPR array Location: 38722-40369 bp Num of repeats: 28 Spacers: s1-s27 Gene: cd09739:cas6f Type: other Location: 40552-41115 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 41119-42147 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 42158-43141 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 43128-44432 bp Gene: COG1203:cas3 Type: Type-I Location: 44490-47720 bp Gene: cd09718:cas1 Type: universal Location: 47717-48691 bp CRISPR array Location: 48943-49390 bp Num of repeats: 8 Spacers: s28-s34 CRISPR array Location: 48943-49390 bp Num of repeats: 8 Spacers: s28-s34 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38722-40369 bp]: array | spacers
           [Locus range 48943-49390 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)