CRISPRone

CRISPRone report for GCA_003839345.1_ASM383934v1

♦ Seq 1: NSXZ01000020.1 Pseudomonas aeruginosa strain AUS029 IPC336_20.1, whole genome shotgun sequence

⇒Summary: seq-len = 9687 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 78-9163 bp Zoom in on locus 1 x12 Gene: cd09739:cas6f Type: other Location: 78-641 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 645-1673 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1684-2667 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2654-3958 bp Gene: COG1203:cas3 Type: Type-I Location: 4016-7246 bp Gene: cd09718:cas1 Type: universal Location: 7243-8217 bp CRISPR array Location: 8475-9163 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 8475-9163 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8475-9163 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSXZ01000001.1 Pseudomonas aeruginosa strain AUS029 IPC336_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 891756 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 403306-404653 bp Zoom in on locus 1 x23 CRISPR array Location: 403306-404653 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 403306-404653 bp Num of repeats: 23 Spacers: s1-s22 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 403306-404653 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NSXZ01000019.1 Pseudomonas aeruginosa strain AUS029 IPC336_19.1, whole genome shotgun sequence

⇒Summary: seq-len = 39877 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38787-39474 bp Zoom in on locus 1 x12 CRISPR array Location: 38787-39474 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 38787-39474 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 38787-39474 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)