CRISPRone

CRISPRone report for GCA_003839375.1_ASM383937v1

♦ Seq 1: NSYC01000003.1 Pseudomonas aeruginosa strain AUS283 IPC323_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 600742 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 71414-81986 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 71414-72454 bp Gene: pfam00078:RT Type: other Location: 77179-78447 bp Gene: unk Type: unknown Location: 78597-78995 bp Gene: unk Type: unknown Location: 79179-79358 bp Gene: cls000170:cas4 Type: Type-I Location: 80442-81986 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSYC01000001.1 Pseudomonas aeruginosa strain AUS283 IPC323_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 1008111 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 716981-729449 bp Zoom in on locus 1 x18 x36 CRISPR array Location: 716981-718048 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 716981-718048 bp Num of repeats: 18 Spacers: s1-s17 Gene: cd09641:cas3HD Type: Type-I Location: 718822-721503 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 721506-723074 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 723071-723601 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 723611-724753 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 724755-725417 bp Gene: pfam08798:cas6e Type: other Location: 725392-726003 bp Gene: cd09719:cas1 Type: universal Location: 726030-726920 bp Gene: pfam09707:cas2 Type: universal Location: 726917-727216 bp CRISPR array Location: 727281-729449 bp Num of repeats: 36 Spacers: s18-s52 CRISPR array Location: 727281-729449 bp Num of repeats: 36 Spacers: s18-s52 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 716981-718048 bp]: array | spacers
           [Locus range 727281-729449 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)