CRISPRone

CRISPRone report for GCA_003839425.1_ASM383942v1

♦ Seq 1: NSYE01000004.1 Pseudomonas aeruginosa strain AUS355 IPC312_4.1, whole genome shotgun sequence

⇒Summary: seq-len = 533636 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 219831-220338 bp Zoom in on locus 1 x9 CRISPR array Location: 219831-220338 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 219831-220338 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 219831-220338 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSYE01000019.1 Pseudomonas aeruginosa strain AUS355 IPC312_19.1, whole genome shotgun sequence

⇒Summary: seq-len = 90070 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 42676-54363 bp Zoom in on locus 1 x22 x25 CRISPR array Location: 42676-43965 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 42676-43965 bp Num of repeats: 22 Spacers: s1-s21 Gene: cd09718:cas1 Type: universal Location: 44225-45199 bp Gene: COG1203:cas3 Type: Type-I Location: 45196-48426 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 48837-50138 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 50125-51108 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 51119-52147 bp Gene: cd09739:cas6f Type: other Location: 52151-52714 bp CRISPR array Location: 52899-54363 bp Num of repeats: 25 Spacers: s22-s45 CRISPR array Location: 52899-54363 bp Num of repeats: 25 Spacers: s22-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 42676-43965 bp]: array | spacers
           [Locus range 52899-54363 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)