CRISPRone

CRISPRone report for GCA_003839475.1_ASM383947v1

♦ Seq 1: NSYJ01000020.1 Pseudomonas aeruginosa strain AUS504 IPC297_20.1, whole genome shotgun sequence

⇒Summary: seq-len = 58160 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 383-1071 bp Zoom in on locus 1 x12 CRISPR array Location: 383-1071 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 383-1071 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 383-1071 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSYJ01000001.1 Pseudomonas aeruginosa strain AUS504 IPC297_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 901635 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 416652-417579 bp Zoom in on locus 1 x16 CRISPR array Location: 416652-417579 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 416652-417579 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 416652-417579 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NSYJ01000026.1 Pseudomonas aeruginosa strain AUS504 IPC297_26.1, whole genome shotgun sequence

⇒Summary: seq-len = 32219 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 794-10862 bp Zoom in on locus 1 x4 x16 CRISPR array Location: 794-1002 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 794-1002 bp Num of repeats: 4 Spacers: s1-s3 Gene: cd09739:cas6f Type: other Location: 1185-1748 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1752-2780 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2791-3774 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3761-5062 bp Gene: COG1203:cas3 Type: Type-I Location: 5473-8703 bp Gene: cd09718:cas1 Type: universal Location: 8700-9674 bp CRISPR array Location: 9935-10862 bp Num of repeats: 16 Spacers: s4-s18 CRISPR array Location: 9935-10862 bp Num of repeats: 16 Spacers: s4-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 794-1002 bp]: array | spacers
           [Locus range 9935-10862 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)