CRISPRone

CRISPRone report for GCA_003839685.1_ASM383968v1

♦ Seq 1: NSYW01000001.1 Pseudomonas aeruginosa strain AUS083 IPC271_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 890924 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 519521-520210 bp Zoom in on locus 1 x12 CRISPR array Location: 519521-520210 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 519521-520210 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 519521-520210 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSYW01000020.1 Pseudomonas aeruginosa strain AUS083 IPC271_20.1, whole genome shotgun sequence

⇒Summary: seq-len = 70834 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38624-49366 bp Zoom in on locus 1 x22 x15 CRISPR array Location: 38624-39912 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 38624-39912 bp Num of repeats: 22 Spacers: s1-s21 Gene: cd09739:cas6f Type: other Location: 40096-40659 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40663-41691 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 41702-42685 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 42672-43976 bp Gene: COG1203:cas3 Type: Type-I Location: 44034-47264 bp Gene: cd09718:cas1 Type: universal Location: 47261-48235 bp CRISPR array Location: 48500-49366 bp Num of repeats: 15 Spacers: s22-s35 CRISPR array Location: 48500-49366 bp Num of repeats: 15 Spacers: s22-s35 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38624-39912 bp]: array | spacers
           [Locus range 48500-49366 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)