CRISPRone

CRISPRone report for GCA_003839755.1_ASM383975v1

♦ Seq 1: NSZA01000026.1 Pseudomonas aeruginosa strain AUS232 IPC258_26.1, whole genome shotgun sequence

⇒Summary: seq-len = 39826 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 336-10112 bp Zoom in on locus 1 x4 x11 CRISPR array Location: 336-544 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 336-544 bp Num of repeats: 4 Spacers: s1-s3 Gene: cd09739:cas6f Type: other Location: 727-1290 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1294-2322 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2333-3316 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3303-4604 bp Gene: COG1203:cas3 Type: Type-I Location: 5019-8249 bp Gene: cd09718:cas1 Type: universal Location: 8246-9220 bp CRISPR array Location: 9485-10112 bp Num of repeats: 11 Spacers: s4-s13 CRISPR array Location: 9485-10112 bp Num of repeats: 11 Spacers: s4-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 336-544 bp]: array | spacers
           [Locus range 9485-10112 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSZA01000008.1 Pseudomonas aeruginosa strain AUS232 IPC258_8.1, whole genome shotgun sequence

⇒Summary: seq-len = 247914 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 145025-145413 bp Zoom in on locus 1 x7 CRISPR array Location: 145025-145413 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 145025-145413 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 145025-145413 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NSZA01000001.1 Pseudomonas aeruginosa strain AUS232 IPC258_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 998350 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 997378-998006 bp Zoom in on locus 1 x11 CRISPR array Location: 997378-998006 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 997378-998006 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 997378-998006 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: NSZA01000011.1 Pseudomonas aeruginosa strain AUS232 IPC258_11.1, whole genome shotgun sequence

⇒Summary: seq-len = 197502 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 90969-91297 bp Zoom in on locus 1 x6 CRISPR array Location: 90969-91297 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 90969-91297 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 90969-91297 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: NSZA01000006.1 Pseudomonas aeruginosa strain AUS232 IPC258_6.1, whole genome shotgun sequence

⇒Summary: seq-len = 367785 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 196840-199024 bp Zoom in on locus 1 x13 x2 CRISPR array Location: 196840-197587 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 196840-197587 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 198936-199024 bp Num of repeats: 2 Spacers: s13-s13 CRISPR array Location: 198936-199024 bp Num of repeats: 2 Spacers: s13-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 196840-197587 bp]: array | spacers
           [Locus range 198936-199024 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: NSZA01000033.1 Pseudomonas aeruginosa strain AUS232 IPC258_33.1, whole genome shotgun sequence

⇒Summary: seq-len = 30089 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 29401-29728 bp Zoom in on locus 1 x6 CRISPR array Location: 29401-29728 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 29401-29728 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 29401-29728 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)