CRISPRone

CRISPRone report for GCA_003839845.1_ASM383984v1

♦ Seq 1: NSZI01000001.1 Pseudomonas aeruginosa strain AUS465 IPC227_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 719253 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 219646-220213 bp Zoom in on locus 1 x10 CRISPR array Location: 219646-220213 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 219646-220213 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 219646-220213 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSZI01000024.1 Pseudomonas aeruginosa strain AUS465 IPC227_24.1, whole genome shotgun sequence

⇒Summary: seq-len = 98840 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 87806-97946 bp Zoom in on locus 1 x13 x14 CRISPR array Location: 87806-88554 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 87806-88554 bp Num of repeats: 13 Spacers: s1-s12 Gene: cd09739:cas6f Type: other Location: 88737-89300 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 89304-90332 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 90343-91326 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 91313-92617 bp Gene: COG1203:cas3 Type: Type-I Location: 92675-95905 bp Gene: cd09718:cas1 Type: universal Location: 95902-96876 bp CRISPR array Location: 97137-97946 bp Num of repeats: 14 Spacers: s13-s25 CRISPR array Location: 97137-97946 bp Num of repeats: 14 Spacers: s13-s25 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 87806-88554 bp]: array | spacers
           [Locus range 97137-97946 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)