CRISPRone

CRISPRone report for GCA_003839915.1_ASM383991v1

♦ Seq 1: NSZG01000015.1 Pseudomonas aeruginosa strain AUS210 IPC231_15.1, whole genome shotgun sequence

⇒Summary: seq-len = 91634 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 42392-53172 bp Zoom in on locus 1 x14 x18 CRISPR array Location: 42392-43201 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 42392-43201 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09718:cas1 Type: universal Location: 43452-44426 bp Gene: COG1203:cas3 Type: Type-I Location: 44423-47653 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 48064-49365 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 49352-50335 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 50346-51374 bp Gene: cd09739:cas6f Type: other Location: 51378-51941 bp CRISPR array Location: 52125-53172 bp Num of repeats: 18 Spacers: s14-s30 CRISPR array Location: 52125-53172 bp Num of repeats: 18 Spacers: s14-s30 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 42392-43201 bp]: array | spacers
           [Locus range 52125-53172 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)