CRISPRone

CRISPRone report for GCA_003839985.1_ASM383998v1

♦ Seq 1: NSZK01000029.1 Pseudomonas aeruginosa strain AUS205 IPC224_29.1, whole genome shotgun sequence

⇒Summary: seq-len = 47963 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37040-46704 bp Zoom in on locus 1 x8 x11 CRISPR array Location: 37040-37488 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 37040-37488 bp Num of repeats: 8 Spacers: s1-s7 Gene: cd09739:cas6f Type: other Location: 37671-38234 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38238-39266 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39277-40260 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40247-41551 bp Gene: COG1203:cas3 Type: Type-I Location: 41609-44845 bp Gene: cd09718:cas1 Type: universal Location: 44842-45816 bp CRISPR array Location: 46077-46704 bp Num of repeats: 11 Spacers: s8-s17 CRISPR array Location: 46077-46704 bp Num of repeats: 11 Spacers: s8-s17 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37040-37488 bp]: array | spacers
           [Locus range 46077-46704 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSZK01000001.1 Pseudomonas aeruginosa strain AUS205 IPC224_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 779557 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 91056-91623 bp Zoom in on locus 1 x10 CRISPR array Location: 91056-91623 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 91056-91623 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 91056-91623 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)