CRISPRone

CRISPRone report for GCA_003839995.1_ASM383999v1

♦ Seq 1: NSZO01000002.1 Pseudomonas aeruginosa strain AUS185 IPC203_2.1, whole genome shotgun sequence

⇒Summary: seq-len = 559054 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 202645-213519 bp Zoom in on locus 1 x17 x11 CRISPR array Location: 202645-203649 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 202645-203649 bp Num of repeats: 17 Spacers: s1-s16 Gene: pfam09707:cas2 Type: universal Location: 203714-204013 bp Gene: cd09719:cas1 Type: universal Location: 204010-204900 bp Gene: pfam08798:cas6e Type: other Location: 204927-205466 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 205513-206175 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 206177-207319 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 207329-207859 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 207856-209424 bp Gene: cd09641:cas3HD Type: Type-I Location: 209427-212108 bp CRISPR array Location: 212881-213519 bp Num of repeats: 11 Spacers: s17-s26 CRISPR array Location: 212881-213519 bp Num of repeats: 11 Spacers: s17-s26 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 202645-203649 bp]: array | spacers
           [Locus range 212881-213519 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSZO01000027.1 Pseudomonas aeruginosa strain AUS185 IPC203_27.1, whole genome shotgun sequence

⇒Summary: seq-len = 28824 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 348-435 bp Zoom in on locus 1 x2 CRISPR array Location: 348-435 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 348-435 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 348-435 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NSZO01000024.1 Pseudomonas aeruginosa strain AUS185 IPC203_24.1, whole genome shotgun sequence

⇒Summary: seq-len = 39014 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37995-38683 bp Zoom in on locus 1 x12 CRISPR array Location: 37995-38683 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 37995-38683 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 37995-38683 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)