CRISPRone

CRISPRone report for GCA_003840205.1_ASM384020v1

♦ Seq 1: NTAD01000008.1 Pseudomonas aeruginosa strain 856 IPC97_8.1, whole genome shotgun sequence

⇒Summary: seq-len = 311713 bp; # of CRISPR array = 0; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 285665-287867 bp Zoom in on locus 1 Gene: cd09693:cas5 Type: Type-I Location: 285665-286072 bp Gene: unk Type: unknown Location: 286100-286786 bp Gene: COG2378:WYL Type: other Location: 286896-287867 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NTAD01000022.1 Pseudomonas aeruginosa strain 856 IPC97_22.1, whole genome shotgun sequence

⇒Summary: seq-len = 69549 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38810-49312 bp Zoom in on locus 1 x21 x12 CRISPR array Location: 38810-40040 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 38810-40040 bp Num of repeats: 21 Spacers: s1-s20 Gene: cd09739:cas6f Type: other Location: 40223-40786 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40790-41818 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 41829-42812 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 42799-44103 bp Gene: COG1203:cas3 Type: Type-I Location: 44161-47391 bp Gene: cd09718:cas1 Type: universal Location: 47388-48362 bp CRISPR array Location: 48624-49312 bp Num of repeats: 12 Spacers: s21-s31 CRISPR array Location: 48624-49312 bp Num of repeats: 12 Spacers: s21-s31 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38810-40040 bp]: array | spacers
           [Locus range 48624-49312 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)