CRISPRone

CRISPRone report for GCA_003840215.1_ASM384021v1

♦ Seq 1: NTAE01000022.1 Pseudomonas aeruginosa strain 903 IPC96_22.1, whole genome shotgun sequence

⇒Summary: seq-len = 76378 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 28634-39363 bp Zoom in on locus 1 x18 x13 CRISPR array Location: 28634-29682 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 28634-29682 bp Num of repeats: 18 Spacers: s1-s17 Gene: cd09718:cas1 Type: universal Location: 29942-30916 bp Gene: COG1203:cas3 Type: Type-I Location: 30913-34143 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 34554-35855 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 35842-36825 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 36836-37864 bp Gene: cd09739:cas6f Type: other Location: 37868-38431 bp CRISPR array Location: 38615-39363 bp Num of repeats: 13 Spacers: s18-s29 CRISPR array Location: 38615-39363 bp Num of repeats: 13 Spacers: s18-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 28634-29682 bp]: array | spacers
           [Locus range 38615-39363 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)