CRISPRone

CRISPRone report for GCA_003840235.1_ASM384023v1

♦ Seq 1: NTAG01000027.1 Pseudomonas aeruginosa strain PA-W49 IPC25_27.1, whole genome shotgun sequence

⇒Summary: seq-len = 49676 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1392-11773 bp Zoom in on locus 1 x23 x8 CRISPR array Location: 1392-2741 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 1392-2741 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 3002-3976 bp Gene: COG1203:cas3 Type: Type-I Location: 3973-7203 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 7261-8565 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 8552-9535 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 9546-10574 bp Gene: cd09739:cas6f Type: other Location: 10578-11141 bp CRISPR array Location: 11326-11773 bp Num of repeats: 8 Spacers: s23-s29 CRISPR array Location: 11326-11773 bp Num of repeats: 8 Spacers: s23-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1392-2741 bp]: array | spacers
           [Locus range 11326-11773 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)