CRISPRone

CRISPRone report for GCA_003840305.1_ASM384030v1

♦ Seq 1: NSVK01000023.1 Pseudomonas aeruginosa strain AMT0071-76 IPC573_23.1, whole genome shotgun sequence

⇒Summary: seq-len = 100371 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 86579-97023 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 86579-87267 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 86579-87267 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 87516-88079 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 88083-89111 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 89122-90105 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 90092-91396 bp Gene: COG1203:cas3 Type: Type-I Location: 91454-94684 bp Gene: cd09718:cas1 Type: universal Location: 94681-95655 bp CRISPR array Location: 95916-97023 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 95916-97023 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 86579-87267 bp]: array | spacers
           [Locus range 95916-97023 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)