CRISPRone

CRISPRone report for GCA_003840445.1_ASM384044v1

♦ Seq 1: NSWR01000001.1 Pseudomonas aeruginosa strain AUS631 IPC460_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 909226 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 413170-414098 bp Zoom in on locus 1 x16 CRISPR array Location: 413170-414098 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 413170-414098 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 413170-414098 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSWR01000003.1 Pseudomonas aeruginosa strain AUS631 IPC460_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 602158 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 304126-315329 bp Zoom in on locus 1 x20 x7 CRISPR array Location: 304126-305314 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 304126-305314 bp Num of repeats: 20 Spacers: s1-s19 Gene: pfam09707:cas2 Type: universal Location: 305379-305678 bp Gene: cd09719:cas1 Type: universal Location: 305675-306565 bp Gene: pfam08798:cas6e Type: other Location: 306592-307131 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 307178-307840 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 307842-308984 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 308994-309524 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 309521-311089 bp Gene: cd09641:cas3HD Type: Type-I Location: 311451-314159 bp CRISPR array Location: 314935-315329 bp Num of repeats: 7 Spacers: s20-s25 CRISPR array Location: 314935-315329 bp Num of repeats: 7 Spacers: s20-s25 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 304126-305314 bp]: array | spacers
           [Locus range 314935-315329 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)