CRISPRone

CRISPRone report for GCA_003840495.1_ASM384049v1

♦ Seq 1: NSWX01000007.1 Pseudomonas aeruginosa strain AUS491 IPC440_7.1, whole genome shotgun sequence

⇒Summary: seq-len = 403715 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 282455-293334 bp Zoom in on locus 1 x19 x9 CRISPR array Location: 282455-283582 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 282455-283582 bp Num of repeats: 19 Spacers: s1-s18 Gene: pfam09707:cas2 Type: universal Location: 283647-283946 bp Gene: cd09719:cas1 Type: universal Location: 283943-284833 bp Gene: pfam08798:cas6e Type: other Location: 284860-285399 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 285446-286108 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 286110-287252 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 287262-287792 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 287789-289357 bp Gene: cd09641:cas3HD Type: Type-I Location: 289360-292041 bp CRISPR array Location: 292817-293334 bp Num of repeats: 9 Spacers: s19-s26 CRISPR array Location: 292817-293334 bp Num of repeats: 9 Spacers: s19-s26 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 282455-283582 bp]: array | spacers
           [Locus range 292817-293334 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)