CRISPRone

CRISPRone report for GCA_003840605.1_ASM384060v1

♦ Seq 1: NSXX01000003.1 Pseudomonas aeruginosa strain AUS054 IPC340_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 868570 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 443843-444231 bp Zoom in on locus 1 x7 CRISPR array Location: 443843-444231 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 443843-444231 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 443843-444231 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSXX01000020.1 Pseudomonas aeruginosa strain AUS054 IPC340_20.1, whole genome shotgun sequence

⇒Summary: seq-len = 28013 bp; # of CRISPR array = 1; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 283-5940 bp Zoom in on locus 1 x25 Gene: COG1203:cas3 Type: Type-I Location: 283-3240 bp Gene: cd09718:cas1 Type: universal Location: 3237-4211 bp CRISPR array Location: 4472-5940 bp Num of repeats: 25 Spacers: s1-s24 CRISPR array Location: 4472-5940 bp Num of repeats: 25 Spacers: s1-s24 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 4472-5940 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NSXX01000017.1 Pseudomonas aeruginosa strain AUS054 IPC340_17.1, whole genome shotgun sequence

⇒Summary: seq-len = 44831 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 338-6286 bp Zoom in on locus 1 x21 Gene: cd09673:cas3f Type: Subtype-I-F Location: 338-589 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1000-2301 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2288-3271 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 3282-4310 bp Gene: cd09739:cas6f Type: other Location: 4314-4877 bp CRISPR array Location: 5062-6286 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 5062-6286 bp Num of repeats: 21 Spacers: s1-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 5062-6286 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)