CRISPRone

CRISPRone report for GCA_003840655.1_ASM384065v1

♦ Seq 1: NSWZ01000018.1 Pseudomonas aeruginosa strain AUS485 IPC436_18.1, whole genome shotgun sequence

⇒Summary: seq-len = 113710 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 113136-113223 bp Zoom in on locus 1 x2 CRISPR array Location: 113136-113223 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 113136-113223 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 113136-113223 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSWZ01000023.1 Pseudomonas aeruginosa strain AUS485 IPC436_23.1, whole genome shotgun sequence

⇒Summary: seq-len = 64748 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 488-10198 bp Zoom in on locus 1 x6 x8 CRISPR array Location: 488-816 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 488-816 bp Num of repeats: 6 Spacers: s1-s5 Gene: cd09718:cas1 Type: universal Location: 1077-2051 bp Gene: COG1203:cas3 Type: Type-I Location: 2048-5278 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5690-6991 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6978-7961 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7972-9000 bp Gene: cd09739:cas6f Type: other Location: 9004-9567 bp CRISPR array Location: 9751-10198 bp Num of repeats: 8 Spacers: s6-s12 CRISPR array Location: 9751-10198 bp Num of repeats: 8 Spacers: s6-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 488-816 bp]: array | spacers
           [Locus range 9751-10198 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NSWZ01000003.1 Pseudomonas aeruginosa strain AUS485 IPC436_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 608864 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 545-632 bp 2 Locus 2: 10682-11069 bp 3 Locus 3: 400547-400634 bp Zoom in on locus 1 x2 Zoom in on locus 2 x7 Zoom in on locus 3 x2 CRISPR array Location: 545-632 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 545-632 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 10682-11069 bp Num of repeats: 7 Spacers: s2-s7 CRISPR array Location: 10682-11069 bp Num of repeats: 7 Spacers: s2-s7 CRISPR array Location: 400547-400634 bp Num of repeats: 2 Spacers: s8-s8 CRISPR array Location: 400547-400634 bp Num of repeats: 2 Spacers: s8-s8 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 545-632 bp]: array | spacers
           [Locus range 10682-11069 bp]: array | spacers
           [Locus range 400547-400634 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: NSWZ01000011.1 Pseudomonas aeruginosa strain AUS485 IPC436_11.1, whole genome shotgun sequence

⇒Summary: seq-len = 216437 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 163838-165479 bp Zoom in on locus 1 x6 x3 CRISPR array Location: 163838-164165 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 163838-164165 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 165331-165479 bp Num of repeats: 3 Spacers: s6-s7 CRISPR array Location: 165331-165479 bp Num of repeats: 3 Spacers: s6-s7 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 163838-164165 bp]: array | spacers
           [Locus range 165331-165479 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)