CRISPRone

CRISPRone report for GCA_003840695.1_ASM384069v1

♦ Seq 1: NSYF01000022.1 Pseudomonas aeruginosa strain AUS238 IPC309_22.1, whole genome shotgun sequence

⇒Summary: seq-len = 49523 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 436-11164 bp Zoom in on locus 1 x14 x17 CRISPR array Location: 436-1244 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 436-1244 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09718:cas1 Type: universal Location: 1504-2478 bp Gene: COG1203:cas3 Type: Type-I Location: 2475-5705 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6116-7417 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7404-8387 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8398-9426 bp Gene: cd09739:cas6f Type: other Location: 9430-9993 bp CRISPR array Location: 10177-11164 bp Num of repeats: 17 Spacers: s14-s29 CRISPR array Location: 10177-11164 bp Num of repeats: 17 Spacers: s14-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 436-1244 bp]: array | spacers
           [Locus range 10177-11164 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSYF01000011.1 Pseudomonas aeruginosa strain AUS238 IPC309_11.1, whole genome shotgun sequence

⇒Summary: seq-len = 210302 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 208761-209867 bp Zoom in on locus 1 x19 CRISPR array Location: 208761-209867 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 208761-209867 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 208761-209867 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)