CRISPRone

CRISPRone report for GCA_003840755.1_ASM384075v1

♦ Seq 1: NSXS01000031.1 Pseudomonas aeruginosa strain AUS093 IPC352_31.1, whole genome shotgun sequence

⇒Summary: seq-len = 1280 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 312-999 bp Zoom in on locus 1 x12 CRISPR array Location: 312-999 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 312-999 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 312-999 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSXS01000009.1 Pseudomonas aeruginosa strain AUS093 IPC352_9.1, whole genome shotgun sequence

⇒Summary: seq-len = 326986 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 107500-109086 bp Zoom in on locus 1 x27 CRISPR array Location: 107500-109086 bp Num of repeats: 27 Spacers: s1-s26 CRISPR array Location: 107500-109086 bp Num of repeats: 27 Spacers: s1-s26 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 107500-109086 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NSXS01000022.1 Pseudomonas aeruginosa strain AUS093 IPC352_22.1, whole genome shotgun sequence

⇒Summary: seq-len = 69931 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1481-10312 bp Zoom in on locus 1 x9 Gene: cd09718:cas1 Type: universal Location: 1481-2455 bp Gene: COG1203:cas3 Type: Type-I Location: 2452-5682 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5740-7044 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7031-8014 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8025-9053 bp Gene: cd09739:cas6f Type: other Location: 9057-9620 bp CRISPR array Location: 9805-10312 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 9805-10312 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 9805-10312 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)