CRISPRone

CRISPRone report for GCA_003840895.1_ASM384089v1

♦ Seq 1: NSZF01000020.1 Pseudomonas aeruginosa strain AUS213 IPC234_20.1, whole genome shotgun sequence

⇒Summary: seq-len = 48493 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 788-10616 bp Zoom in on locus 1 x10 x12 CRISPR array Location: 788-1356 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 788-1356 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09718:cas1 Type: universal Location: 1607-2581 bp Gene: COG1203:cas3 Type: Type-I Location: 2578-5808 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5866-7170 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7157-8140 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8151-9179 bp Gene: cd09739:cas6f Type: other Location: 9183-9746 bp CRISPR array Location: 9930-10616 bp Num of repeats: 12 Spacers: s10-s20 CRISPR array Location: 9930-10616 bp Num of repeats: 12 Spacers: s10-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 788-1356 bp]: array | spacers
           [Locus range 9930-10616 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSZF01000013.1 Pseudomonas aeruginosa strain AUS213 IPC234_13.1, whole genome shotgun sequence

⇒Summary: seq-len = 213685 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 211908-212896 bp Zoom in on locus 1 x17 CRISPR array Location: 211908-212896 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 211908-212896 bp Num of repeats: 17 Spacers: s1-s16 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 211908-212896 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)