CRISPRone

CRISPRone report for GCA_003840965.1_ASM384096v1

♦ Seq 1: NSZB01000014.1 Pseudomonas aeruginosa strain AUS229 IPC255_14.1, whole genome shotgun sequence

⇒Summary: seq-len = 81833 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37979-48779 bp Zoom in on locus 1 x23 x15 CRISPR array Location: 37979-39327 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 37979-39327 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09739:cas6f Type: other Location: 39510-40073 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40077-41105 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 41116-42099 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 42086-43390 bp Gene: COG1203:cas3 Type: Type-I Location: 43448-46678 bp Gene: cd09718:cas1 Type: universal Location: 46675-47649 bp CRISPR array Location: 47910-48779 bp Num of repeats: 15 Spacers: s23-s36 CRISPR array Location: 47910-48779 bp Num of repeats: 15 Spacers: s23-s36 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37979-39327 bp]: array | spacers
           [Locus range 47910-48779 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)