CRISPRone

CRISPRone report for GCA_003841015.1_ASM384101v1

♦ Seq 1: NSZL01000025.1 Pseudomonas aeruginosa strain AUS195 IPC215_25.1, whole genome shotgun sequence

⇒Summary: seq-len = 22529 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 321-648 bp Zoom in on locus 1 x6 CRISPR array Location: 321-648 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 321-648 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 321-648 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSZL01000015.1 Pseudomonas aeruginosa strain AUS195 IPC215_15.1, whole genome shotgun sequence

⇒Summary: seq-len = 160203 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 101887-102395 bp Zoom in on locus 1 x9 CRISPR array Location: 101887-102395 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 101887-102395 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 101887-102395 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NSZL01000022.1 Pseudomonas aeruginosa strain AUS195 IPC215_22.1, whole genome shotgun sequence

⇒Summary: seq-len = 44614 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 34131-44329 bp Zoom in on locus 1 x23 x5 CRISPR array Location: 34131-35479 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 34131-35479 bp Num of repeats: 23 Spacers: s1-s22 Gene: pfam09618:cas6f Type: Subtype-I-F Location: 35662-36225 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 36229-37257 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 37268-38251 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 38238-39542 bp Gene: COG1203:cas3 Type: Type-I Location: 39600-42830 bp Gene: cd09718:cas1 Type: universal Location: 42827-43801 bp CRISPR array Location: 44062-44329 bp Num of repeats: 5 Spacers: s23-s26 CRISPR array Location: 44062-44329 bp Num of repeats: 5 Spacers: s23-s26 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 34131-35479 bp]: array | spacers
           [Locus range 44062-44329 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)