CRISPRone

CRISPRone report for GCA_003841205.1_ASM384120v1

♦ Seq 1: NTAW01000009.1 Pseudomonas aeruginosa strain PA-W13 IPC8_9.1, whole genome shotgun sequence

⇒Summary: seq-len = 186981 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 475-2365 bp Zoom in on locus 1 x32 CRISPR array Location: 475-2365 bp Num of repeats: 32 Spacers: s1-s31 CRISPR array Location: 475-2365 bp Num of repeats: 32 Spacers: s1-s31 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 475-2365 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NTAW01000012.1 Pseudomonas aeruginosa strain PA-W13 IPC8_12.1, whole genome shotgun sequence

⇒Summary: seq-len = 111344 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38025-48695 bp Zoom in on locus 1 x17 x13 CRISPR array Location: 38025-39015 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 38025-39015 bp Num of repeats: 17 Spacers: s1-s16 Gene: cd09739:cas6f Type: other Location: 39198-39761 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39765-40793 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40804-41787 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41774-43075 bp Gene: COG1203:cas3 Type: Type-I Location: 43486-46716 bp Gene: cd09718:cas1 Type: universal Location: 46713-47687 bp CRISPR array Location: 47948-48695 bp Num of repeats: 13 Spacers: s17-s28 CRISPR array Location: 47948-48695 bp Num of repeats: 13 Spacers: s17-s28 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38025-39015 bp]: array | spacers
           [Locus range 47948-48695 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)