CRISPRone

CRISPRone report for GCA_003841515.1_ASM384151v1

♦ Seq 1: NTAH01000027.1 Pseudomonas aeruginosa strain PA-W48 IPC24_27.1, whole genome shotgun sequence

⇒Summary: seq-len = 68743 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36949-49188 bp Zoom in on locus 1 x22 x40 CRISPR array Location: 36949-38237 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 36949-38237 bp Num of repeats: 22 Spacers: s1-s21 Gene: cd09739:cas6f Type: other Location: 38420-38983 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38987-40015 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40026-41009 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40996-42300 bp Gene: COG1203:cas3 Type: Type-I Location: 42358-45588 bp Gene: cd09718:cas1 Type: universal Location: 45585-46559 bp CRISPR array Location: 46821-49188 bp Num of repeats: 40 Spacers: s22-s60 CRISPR array Location: 46821-49188 bp Num of repeats: 40 Spacers: s22-s60 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36949-38237 bp]: array | spacers
           [Locus range 46821-49188 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)