CRISPRone

CRISPRone report for GCA_003841625.1_ASM384162v1

♦ Seq 1: NTAQ01000001.1 Pseudomonas aeruginosa strain PA-W22 IPC14_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 910634 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 699775-710772 bp Zoom in on locus 1 x10 x20 CRISPR array Location: 699775-700353 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 699775-700353 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09641:cas3HD Type: Type-I Location: 701125-703806 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 703809-705377 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 705374-705904 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 705914-707056 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 707058-707720 bp Gene: pfam08798:cas6e Type: other Location: 707695-708306 bp Gene: cd09719:cas1 Type: universal Location: 708333-709223 bp Gene: pfam09707:cas2 Type: universal Location: 709220-709519 bp CRISPR array Location: 709584-710772 bp Num of repeats: 20 Spacers: s10-s28 CRISPR array Location: 709584-710772 bp Num of repeats: 20 Spacers: s10-s28 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 699775-700353 bp]: array | spacers
           [Locus range 709584-710772 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NTAQ01000008.1 Pseudomonas aeruginosa strain PA-W22 IPC14_8.1, whole genome shotgun sequence

⇒Summary: seq-len = 410342 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 824-1873 bp Zoom in on locus 1 x18 CRISPR array Location: 824-1873 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 824-1873 bp Num of repeats: 18 Spacers: s1-s17 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 824-1873 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)