CRISPRone

CRISPRone report for GCA_003841645.1_ASM384164v1

♦ Seq 1: NTAT01000003.1 Pseudomonas aeruginosa strain PA-W18 IPC11_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 704274 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 46499-57010 bp Zoom in on locus 1 x13 x9 CRISPR array Location: 46499-47260 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 46499-47260 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 47325-47624 bp Gene: cd09719:cas1 Type: universal Location: 47621-48511 bp Gene: pfam08798:cas6e Type: other Location: 48538-49077 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 49124-49786 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 49788-50930 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 50940-51470 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 51467-53035 bp Gene: cd09641:cas3HD Type: Type-I Location: 53038-55719 bp CRISPR array Location: 56493-57010 bp Num of repeats: 9 Spacers: s13-s20 CRISPR array Location: 56493-57010 bp Num of repeats: 9 Spacers: s13-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 46499-47260 bp]: array | spacers
           [Locus range 56493-57010 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)