CRISPRone

CRISPRone report for GCA_003841755.1_ASM384175v1

♦ Seq 1: NTBA01000004.1 Pseudomonas aeruginosa strain PA-W8 IPC4_4.1, whole genome shotgun sequence

⇒Summary: seq-len = 537233 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 302333-312791 bp Zoom in on locus 1 x41 CRISPR array Location: 302333-305014 bp Num of repeats: 41 Spacers: s1-s40 CRISPR array Location: 302333-305014 bp Num of repeats: 41 Spacers: s1-s40 Gene: cd09725:cas2 Type: universal Location: 305196-305486 bp Gene: cd09721:cas1 Type: universal Location: 305496-306536 bp Gene: pfam01930:cas4 Type: Type-I Location: 306540-307172 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 307191-308060 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 308072-309835 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 309832-310506 bp Gene: cd09641:cas3HD Type: Type-I Location: 310557-312791 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 302333-305014 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NTBA01000010.1 Pseudomonas aeruginosa strain PA-W8 IPC4_10.1, whole genome shotgun sequence

⇒Summary: seq-len = 231650 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 182691-193050 bp Zoom in on locus 1 x11 x14 CRISPR array Location: 182691-183319 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 182691-183319 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09718:cas1 Type: universal Location: 183570-184544 bp Gene: COG1203:cas3 Type: Type-I Location: 184541-187771 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 188182-189483 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 189470-190453 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 190464-191492 bp Gene: cd09739:cas6f Type: other Location: 191496-192059 bp CRISPR array Location: 192243-193050 bp Num of repeats: 14 Spacers: s11-s23 CRISPR array Location: 192243-193050 bp Num of repeats: 14 Spacers: s11-s23 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 182691-183319 bp]: array | spacers
           [Locus range 192243-193050 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)