CRISPRone

CRISPRone report for GCA_003841805.1_ASM384180v1

♦ Seq 1: NTAZ01000010.1 Pseudomonas aeruginosa strain PA-W9 IPC5_10.1, whole genome shotgun sequence

⇒Summary: seq-len = 228747 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 182684-193043 bp Zoom in on locus 1 x11 x14 CRISPR array Location: 182684-183312 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 182684-183312 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09718:cas1 Type: universal Location: 183563-184537 bp Gene: COG1203:cas3 Type: Type-I Location: 184534-187764 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 188175-189476 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 189463-190446 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 190457-191485 bp Gene: cd09739:cas6f Type: other Location: 191489-192052 bp CRISPR array Location: 192236-193043 bp Num of repeats: 14 Spacers: s11-s23 CRISPR array Location: 192236-193043 bp Num of repeats: 14 Spacers: s11-s23 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 182684-183312 bp]: array | spacers
           [Locus range 192236-193043 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NTAZ01000006.1 Pseudomonas aeruginosa strain PA-W9 IPC5_6.1, whole genome shotgun sequence

⇒Summary: seq-len = 492600 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 257700-268158 bp Zoom in on locus 1 x41 CRISPR array Location: 257700-260381 bp Num of repeats: 41 Spacers: s1-s40 CRISPR array Location: 257700-260381 bp Num of repeats: 41 Spacers: s1-s40 Gene: cd09725:cas2 Type: universal Location: 260563-260853 bp Gene: cd09721:cas1 Type: universal Location: 260863-261903 bp Gene: pfam01930:cas4 Type: Type-I Location: 261907-262539 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 262558-263427 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 263439-265202 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 265199-265873 bp Gene: cd09641:cas3HD Type: Type-I Location: 265924-268158 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 257700-260381 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)