CRISPRone

CRISPRone report for GCA_003862655.1_ASM386265v1

♦ Seq 1: RRAS01000001.1 Clostridioides difficile strain 17-278-08330 MRSN537896_contig00001, whole genome shotgun sequence

⇒Summary: seq-len = 473249 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 252615-254279 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RRAS01000032.1 Clostridioides difficile strain 17-278-08330 MRSN537896_contig00032, whole genome shotgun sequence

⇒Summary: seq-len = 68532 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 63628-64777 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: RRAS01000002.1 Clostridioides difficile strain 17-278-08330 MRSN537896_contig00002, whole genome shotgun sequence

⇒Summary: seq-len = 57398 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12733-12826 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: RRAS01000028.1 Clostridioides difficile strain 17-278-08330 MRSN537896_contig00028, whole genome shotgun sequence

⇒Summary: seq-len = 96984 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18326-19083 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: RRAS01000026.1 Clostridioides difficile strain 17-278-08330 MRSN537896_contig00026, whole genome shotgun sequence

⇒Summary: seq-len = 401755 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 291426-291587 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: RRAS01000010.1 Clostridioides difficile strain 17-278-08330 MRSN537896_contig00010, whole genome shotgun sequence

⇒Summary: seq-len = 370722 bp; # of CRISPR array = 2; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 80588-81204 bp]: array | spacers
           [Locus range 326080-326437 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: RRAS01000060.1 Clostridioides difficile strain 17-278-08330 MRSN537896_contig00060, whole genome shotgun sequence

⇒Summary: seq-len = 7696 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 170-594 bp]: array | spacers
           [Locus range 2198-2422 bp]: array | spacers
           [Locus range 4215-5101 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: RRAS01000058.1 Clostridioides difficile strain 17-278-08330 MRSN537896_contig00058, whole genome shotgun sequence

⇒Summary: seq-len = 8215 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 171-463 bp]: array | spacers
           [Locus range 2146-2372 bp]: array | spacers
           [Locus range 4234-4729 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: RRAS01000027.1 Clostridioides difficile strain 17-278-08330 MRSN537896_contig00027, whole genome shotgun sequence

⇒Summary: seq-len = 216402 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 124455-125014 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)