CRISPRone

CRISPRone report for GCA_003862855.1_ASM386285v1

♦ Seq 1: RRAE01000026.1 Clostridioides difficile strain 17-223-04457 MRSN510066_contig00026, whole genome shotgun sequence

⇒Summary: seq-len = 96672 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18326-19083 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RRAE01000021.1 Clostridioides difficile strain 17-223-04457 MRSN510066_contig00021, whole genome shotgun sequence

⇒Summary: seq-len = 88030 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 49315-49408 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: RRAE01000017.1 Clostridioides difficile strain 17-223-04457 MRSN510066_contig00017, whole genome shotgun sequence

⇒Summary: seq-len = 371689 bp; # of CRISPR array = 2; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 80588-81204 bp]: array | spacers
           [Locus range 326080-326437 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: RRAE01000025.1 Clostridioides difficile strain 17-223-04457 MRSN510066_contig00025, whole genome shotgun sequence

⇒Summary: seq-len = 215999 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 124048-124607 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: RRAE01000020.1 Clostridioides difficile strain 17-223-04457 MRSN510066_contig00020, whole genome shotgun sequence

⇒Summary: seq-len = 350944 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 166993-168592 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: RRAE01000023.1 Clostridioides difficile strain 17-223-04457 MRSN510066_contig00023, whole genome shotgun sequence

⇒Summary: seq-len = 401905 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 110170-110330 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: RRAE01000057.1 Clostridioides difficile strain 17-223-04457 MRSN510066_contig00057, whole genome shotgun sequence

⇒Summary: seq-len = 7696 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 170-594 bp]: array | spacers
           [Locus range 2198-2422 bp]: array | spacers
           [Locus range 4215-5101 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: RRAE01000058.1 Clostridioides difficile strain 17-223-04457 MRSN510066_contig00058, whole genome shotgun sequence

⇒Summary: seq-len = 8215 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3488-3982 bp]: array | spacers
           [Locus range 5845-6070 bp]: array | spacers
           [Locus range 7754-8045 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: RRAE01000048.1 Clostridioides difficile strain 17-223-04457 MRSN510066_contig00048, whole genome shotgun sequence

⇒Summary: seq-len = 68392 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 63555-64638 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)