CRISPRone

CRISPRone report for GCA_003932635.1_ASM393263v1

♦ Seq 1: RQZM01000029.1 Clostridioides difficile strain 16-349-12971 MRSN439716_contig00029, whole genome shotgun sequence

⇒Summary: seq-len = 213565 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 90796-91554 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RQZM01000013.1 Clostridioides difficile strain 16-349-12971 MRSN439716_contig00013, whole genome shotgun sequence

⇒Summary: seq-len = 187780 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 174781-176191 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: RQZM01000002.1 Clostridioides difficile strain 16-349-12971 MRSN439716_contig00002, whole genome shotgun sequence

⇒Summary: seq-len = 109753 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 36234-36395 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: RQZM01000017.1 Clostridioides difficile strain 16-349-12971 MRSN439716_contig00017, whole genome shotgun sequence

⇒Summary: seq-len = 295197 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 47386-48407 bp]: array | spacers
           [Locus range 50175-50601 bp]: array | spacers
           [Locus range 52303-52923 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: RQZM01000001.1 Clostridioides difficile strain 16-349-12971 MRSN439716_contig00001, whole genome shotgun sequence

⇒Summary: seq-len = 880354 bp; # of CRISPR array = 2; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 278355-278913 bp]: array | spacers
           [Locus range 522522-523277 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: RQZM01000051.1 Clostridioides difficile strain 16-349-12971 MRSN439716_contig00051, whole genome shotgun sequence

⇒Summary: seq-len = 60336 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 55637-56720 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: RQZM01000011.1 Clostridioides difficile strain 16-349-12971 MRSN439716_contig00011, whole genome shotgun sequence

⇒Summary: seq-len = 35194 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 19780-19874 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: RQZM01000034.1 Clostridioides difficile strain 16-349-12971 MRSN439716_contig00034, whole genome shotgun sequence

⇒Summary: seq-len = 80278 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 62069-62624 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: RQZM01000015.1 Clostridioides difficile strain 16-349-12971 MRSN439716_contig00015, whole genome shotgun sequence

⇒Summary: seq-len = 14356 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8741-9293 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)