CRISPRone

CRISPRone report for GCA_003952325.1_ASM395232v1

♦ Seq 1: CP034436.1 Pseudomonas aeruginosa strain B17932 chromosome, complete genome

⇒Summary: seq-len = 6744658 bp; # of CRISPR array = 3; # of cas gene = 10  (type I, IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3383039-3393348 bp 2 Locus 2: 4751311-4751758 bp 3 Locus 3: 6698928-6708789 bp Zoom in on locus 1 x13 x17 Zoom in on locus 2 x8 Zoom in on locus 3 CRISPR array Location: 3383039-3383787 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 3383039-3383787 bp Num of repeats: 13 Spacers: s1-s12 Gene: cd09718:cas1 Type: universal Location: 3384038-3385012 bp Gene: COG1203:cas3 Type: Type-I Location: 3385009-3388239 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3388297-3389601 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 3389588-3390571 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 3390582-3391610 bp Gene: cd09739:cas6f Type: other Location: 3391614-3392177 bp CRISPR array Location: 3392361-3393348 bp Num of repeats: 17 Spacers: s13-s28 CRISPR array Location: 3392361-3393348 bp Num of repeats: 17 Spacers: s13-s28 CRISPR array Location: 4751311-4751758 bp Num of repeats: 8 Spacers: s29-s35 CRISPR array Location: 4751311-4751758 bp Num of repeats: 8 Spacers: s29-s35 Gene: mkCas0115:csx3 Type: other Location: 6698928-6700538 bp Gene: pfam13280:WYL Type: other Location: 6700699-6701715 bp Gene: unk Type: unknown Location: 6702987-6703166 bp Gene: unk Type: unknown Location: 6703476-6704009 bp Gene: pfam13280:WYL Type: other Location: 6704024-6704899 bp Gene: unk Type: unknown Location: 6705030-6705317 bp Gene: unk Type: unknown Location: 6705452-6706030 bp Gene: COG1199:DinG Type: Subtype-IV-A Location: 6706423-6708789 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 3383039-3383787 bp]: array | spacers
           [Locus range 3392361-3393348 bp]: array | spacers
           [Locus range 4751311-4751758 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)