CRISPRone

CRISPRone report for GCA_003954525.1_ASM395452v1

♦ Seq 1: RWWP01000072.1 Pseudomonas aeruginosa strain U1849 GCID_CRPK_0014_NODE_62.ctg_1, whole genome shotgun sequence

⇒Summary: seq-len = 37784 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 25565-36080 bp Zoom in on locus 1 x12 x10 CRISPR array Location: 25565-26267 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 25565-26267 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09641:cas3HD Type: Type-I Location: 27042-29723 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 29726-31294 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 31291-31821 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 31831-32973 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 32975-33637 bp Gene: pfam08798:cas6e Type: other Location: 33612-34223 bp Gene: cd09719:cas1 Type: universal Location: 34250-35140 bp Gene: pfam09707:cas2 Type: universal Location: 35137-35436 bp CRISPR array Location: 35501-36080 bp Num of repeats: 10 Spacers: s12-s20 CRISPR array Location: 35501-36080 bp Num of repeats: 10 Spacers: s12-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 25565-26267 bp]: array | spacers
           [Locus range 35501-36080 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)