CRISPRone

CRISPRone report for GCA_003955475.1_ASM395547v1

♦ Seq 1: RWXN01000026.1 Pseudomonas aeruginosa strain R2637 GCID_CRPK_0002_NODE_11.ctg_1, whole genome shotgun sequence

⇒Summary: seq-len = 153009 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 12855-23609 bp Zoom in on locus 1 x10 x16 CRISPR array Location: 12855-13433 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 12855-13433 bp Num of repeats: 10 Spacers: s1-s9 Gene: pfam09707:cas2 Type: universal Location: 13498-13797 bp Gene: cd09719:cas1 Type: universal Location: 13794-14684 bp Gene: pfam08798:cas6e Type: other Location: 14711-15250 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 15297-15959 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 15961-17103 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 17113-17643 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 17640-19208 bp Gene: cd09641:cas3HD Type: Type-I Location: 19211-21892 bp CRISPR array Location: 22665-23609 bp Num of repeats: 16 Spacers: s10-s24 CRISPR array Location: 22665-23609 bp Num of repeats: 16 Spacers: s10-s24 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 12855-13433 bp]: array | spacers
           [Locus range 22665-23609 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)