CRISPRone

CRISPRone report for GCA_003967475.1_ASM396747v1

♦ Seq 1: BIFN01000126.1 Pseudomonas aeruginosa TUM17825 DNA, sequence126, whole genome shotgun sequence

⇒Summary: seq-len = 10000 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8277-9926 bp Zoom in on locus 1 x28 CRISPR array Location: 8277-9926 bp Num of repeats: 28 Spacers: s1-s27 CRISPR array Location: 8277-9926 bp Num of repeats: 28 Spacers: s1-s27 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 8277-9926 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: BIFN01000058.1 Pseudomonas aeruginosa TUM17825 DNA, sequence058, whole genome shotgun sequence

⇒Summary: seq-len = 38193 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 135-9743 bp Zoom in on locus 1 x22 Gene: cd09718:cas1 Type: universal Location: 135-1109 bp Gene: COG1203:cas3 Type: Type-I Location: 1106-4336 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 4394-5698 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 5685-6668 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 6679-7707 bp Gene: cd09739:cas6f Type: other Location: 7711-8274 bp CRISPR array Location: 8459-9743 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 8459-9743 bp Num of repeats: 22 Spacers: s1-s21 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8459-9743 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: BIFN01000086.1 Pseudomonas aeruginosa TUM17825 DNA, sequence086, whole genome shotgun sequence

⇒Summary: seq-len = 27784 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 22637-23564 bp Zoom in on locus 1 x16 CRISPR array Location: 22637-23564 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 22637-23564 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 22637-23564 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: BIFN01000017.1 Pseudomonas aeruginosa TUM17825 DNA, sequence017, whole genome shotgun sequence

⇒Summary: seq-len = 95755 bp; # of CRISPR array = 0; # of cas gene = 4  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 54669-62930 bp Zoom in on locus 1 Gene: mkCas0115:csx3 Type: other Location: 54669-56279 bp Gene: pfam13280:WYL Type: other Location: 56440-57456 bp Gene: COG2378:WYL Type: other Location: 58198-59040 bp Gene: unk Type: unknown Location: 59171-59458 bp Gene: unk Type: unknown Location: 59593-60171 bp Gene: COG1199:DinG Type: Subtype-IV-A Location: 60564-62930 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)