CRISPRone

CRISPRone report for GCA_003968015.1_ASM396801v1

♦ Seq 1: RXTB01000210.1 Pseudomonas aeruginosa strain MRSN8914 MRSN8914_contig00210, whole genome shotgun sequence

⇒Summary: seq-len = 676 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 343-611 bp Zoom in on locus 1 x5 CRISPR array Location: 343-611 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 343-611 bp Num of repeats: 5 Spacers: s1-s4 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 343-611 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXTB01000066.1 Pseudomonas aeruginosa strain MRSN8914 MRSN8914_contig00066, whole genome shotgun sequence

⇒Summary: seq-len = 92950 bp; # of CRISPR array = 0; # of cas gene = 4  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 46980-55241 bp Zoom in on locus 1 Gene: mkCas0115:csx3 Type: other Location: 46980-48590 bp Gene: pfam13280:WYL Type: other Location: 48751-49767 bp Gene: COG2378:WYL Type: other Location: 50509-51351 bp Gene: unk Type: unknown Location: 51401-51769 bp Gene: unk Type: unknown Location: 51835-52482 bp Gene: COG1199:DinG Type: Subtype-IV-A Location: 52875-55241 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: RXTB01000152.1 Pseudomonas aeruginosa strain MRSN8914 MRSN8914_contig00152, whole genome shotgun sequence

⇒Summary: seq-len = 52523 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 30510-37298 bp Zoom in on locus 1 Gene: mkCas0115:csx3 Type: other Location: 30510-31541 bp Gene: unk Type: unknown Location: 31534-31851 bp Gene: unk Type: unknown Location: 31986-32876 bp Gene: pfam13280:WYL Type: other Location: 33156-34064 bp Gene: cd09696:cas3 Type: Subtype-I-U Location: 34077-37298 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)