CRISPRone

CRISPRone report for GCA_003968125.1_ASM396812v1

♦ Seq 1: RXTF01000028.1 Pseudomonas aeruginosa strain MRSN8136 MRSN8136_contig00028, whole genome shotgun sequence

⇒Summary: seq-len = 72586 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 40168-53258 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 40168-40473 bp Gene: unk Type: unknown Location: 40520-40894 bp Gene: unk Type: unknown Location: 41009-41242 bp Gene: cd09641:cas3HD Type: Type-I Location: 41415-43274 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 52956-53258 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXTF01000034.1 Pseudomonas aeruginosa strain MRSN8136 MRSN8136_contig00034, whole genome shotgun sequence

⇒Summary: seq-len = 156791 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 136389-142598 bp Zoom in on locus 1 x8 Gene: pfam03787:csm3gr7 Type: Type-III Location: 136389-137489 bp Gene: pfam09618:cas6f Type: Subtype-I-F Location: 137477-138031 bp Gene: COG1199:DinG Type: Subtype-IV-A Location: 138045-140258 bp Gene: mkCas0093:csf3gr5 Type: Subtype-IV-A Location: 140258-140938 bp Gene: COG1518:cas1 Type: universal Location: 140943-141812 bp Gene: cd09673:cas3f Type: Subtype-I-F Location: 141793-142128 bp CRISPR array Location: 142152-142598 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 142152-142598 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 142152-142598 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)