CRISPRone

CRISPRone report for GCA_003968155.1_ASM396815v1

♦ Seq 1: RXTL01000041.1 Pseudomonas aeruginosa strain MRSN6241 MRSN6241_contig00041, whole genome shotgun sequence

⇒Summary: seq-len = 74078 bp; # of CRISPR array = 0; # of cas gene = 3  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 27226-33197 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 27226-28101 bp Gene: pfam13280:WYL Type: other Location: 30410-31426 bp Gene: mkCas0115:csx3 Type: other Location: 31485-33197 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXTL01000034.1 Pseudomonas aeruginosa strain MRSN6241 MRSN6241_contig00034, whole genome shotgun sequence

⇒Summary: seq-len = 103689 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 801-1130 bp Zoom in on locus 1 x6 CRISPR array Location: 801-1130 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 801-1130 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 801-1130 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: RXTL01000097.1 Pseudomonas aeruginosa strain MRSN6241 MRSN6241_contig00097, whole genome shotgun sequence

⇒Summary: seq-len = 1677 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 28-596 bp Zoom in on locus 1 x10 CRISPR array Location: 28-596 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 28-596 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 28-596 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: RXTL01000012.1 Pseudomonas aeruginosa strain MRSN6241 MRSN6241_contig00012, whole genome shotgun sequence

⇒Summary: seq-len = 80351 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 25330-25658 bp Zoom in on locus 1 x6 CRISPR array Location: 25330-25658 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 25330-25658 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 25330-25658 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)