CRISPRone

CRISPRone report for GCA_003968315.1_ASM396831v1

♦ Seq 1: RXTS01000009.1 Pseudomonas aeruginosa strain MRSN5498 MRSN5498_contig00009, whole genome shotgun sequence

⇒Summary: seq-len = 293674 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 141371-152003 bp Zoom in on locus 1 x15 x9 CRISPR array Location: 141371-142254 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 141371-142254 bp Num of repeats: 15 Spacers: s1-s14 Gene: pfam09707:cas2 Type: universal Location: 142319-142618 bp Gene: cd09719:cas1 Type: universal Location: 142615-143505 bp Gene: pfam08798:cas6e Type: other Location: 143532-144071 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 144118-144780 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 144782-145924 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 145934-146464 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 146461-148029 bp Gene: cd09641:cas3HD Type: Type-I Location: 148032-150713 bp CRISPR array Location: 151487-152003 bp Num of repeats: 9 Spacers: s15-s22 CRISPR array Location: 151487-152003 bp Num of repeats: 9 Spacers: s15-s22 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 141371-142254 bp]: array | spacers
           [Locus range 151487-152003 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)