CRISPRone

CRISPRone report for GCA_003968385.1_ASM396838v1

♦ Seq 1: RXUX01000007.1 Pseudomonas aeruginosa strain MRSN19711 MRSN19711_contig00007, whole genome shotgun sequence

⇒Summary: seq-len = 26004 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1606-13459 bp Zoom in on locus 1 x25 x19 CRISPR array Location: 1606-3099 bp Num of repeats: 25 Spacers: s1-s24 CRISPR array Location: 1606-3099 bp Num of repeats: 25 Spacers: s1-s24 Gene: pfam09707:cas2 Type: universal Location: 3164-3463 bp Gene: cd09719:cas1 Type: universal Location: 3460-4350 bp Gene: pfam08798:cas6e Type: other Location: 4377-4916 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 4963-5625 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 5627-6769 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 6779-7309 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 7306-8874 bp Gene: cd09641:cas3HD Type: Type-I Location: 8877-11558 bp CRISPR array Location: 12333-13459 bp Num of repeats: 19 Spacers: s25-s42 CRISPR array Location: 12333-13459 bp Num of repeats: 19 Spacers: s25-s42 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1606-3099 bp]: array | spacers
           [Locus range 12333-13459 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)