CRISPRone

CRISPRone report for GCA_003968475.1_ASM396847v1

♦ Seq 1: RXTD01000033.1 Pseudomonas aeruginosa strain MRSN8141 MRSN8141_contig00033, whole genome shotgun sequence

⇒Summary: seq-len = 103690 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 801-1130 bp Zoom in on locus 1 x6 CRISPR array Location: 801-1130 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 801-1130 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 801-1130 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RXTD01000025.1 Pseudomonas aeruginosa strain MRSN8141 MRSN8141_contig00025, whole genome shotgun sequence

⇒Summary: seq-len = 79888 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 25330-25658 bp Zoom in on locus 1 x6 CRISPR array Location: 25330-25658 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 25330-25658 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 25330-25658 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: RXTD01000098.1 Pseudomonas aeruginosa strain MRSN8141 MRSN8141_contig00098, whole genome shotgun sequence

⇒Summary: seq-len = 1679 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 29-597 bp Zoom in on locus 1 x10 CRISPR array Location: 29-597 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 29-597 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 29-597 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: RXTD01000040.1 Pseudomonas aeruginosa strain MRSN8141 MRSN8141_contig00040, whole genome shotgun sequence

⇒Summary: seq-len = 74078 bp; # of CRISPR array = 0; # of cas gene = 3  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 40882-46853 bp Zoom in on locus 1 Gene: mkCas0115:csx3 Type: other Location: 40882-42594 bp Gene: pfam13280:WYL Type: other Location: 42653-43669 bp Gene: pfam13280:WYL Type: other Location: 45978-46853 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)