CRISPRone

CRISPRone report for GCA_003968585.1_ASM396858v1

♦ Seq 1: RXUG01000013.1 Pseudomonas aeruginosa strain MRSN321 MRSN321_contig00013, whole genome shotgun sequence

⇒Summary: seq-len = 78409 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 29913-40653 bp Zoom in on locus 1 x23 x14 CRISPR array Location: 29913-31262 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 29913-31262 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 31522-32496 bp Gene: COG1203:cas3 Type: Type-I Location: 32493-35723 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 35781-37085 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 37072-38055 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38066-39094 bp Gene: cd09739:cas6f Type: other Location: 39098-39661 bp CRISPR array Location: 39846-40653 bp Num of repeats: 14 Spacers: s23-s35 CRISPR array Location: 39846-40653 bp Num of repeats: 14 Spacers: s23-s35 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 29913-31262 bp]: array | spacers
           [Locus range 39846-40653 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)